1. Preheat oven to 425 degrees F. Place the squash halves skin side down on a rimmed baking sheet.
2. Drizzle with 1-2 tablespoons of olive oil, sprinkle with salt and pepper, cayenne pepper and ground chilli. Bake for 45 minutes to an hour until brown and fork tender.
3. When the roasted squash is cool enough (wait about 5 minutes) to handle, discard the seeds and scoop out as much roasted squash into a blender, add the miso paste and blend until you reach a nice smooth consistency
4. To make the pecan crumble, to a small bowl, add the chopped pecans, brown sugar, butter and everything bagel seasoning, Using your hands mix everything together and set aside.
5. Preheat oven to 400 degrees F.
6. Organize all your toppings within reach for assembly
7. Place pitas or store bought pizza doughs onto a lined baking sheet. Rub each pita with a small amount of olive oil. Next spread the miso puree.
8. Top with sliced apples and fresh thyme. Gently press the pecan crumble over apples, making sure to divide the crumble to cover each pita.
10. Bake for 8-10 minutes. Finish with fresh cracked black pepper, red pepper flakes, green onions and drizzle of honey.
11. Slice and serve.